Browsing by Author "Whetton, Rebecca L."
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Item Open Access Evaluating management zone maps for variable rate fungicide application and selective harvest(Elsevier, 2018-08-23) Whetton, Rebecca L.; Waine, Toby W.; Mouazen, Abdul M.Currently the majority of crop protection approaches are based on homogeneous rate fungicide application (HRFA) over the entire field area. With the increasing pressures on fungicide applications, associated with increased environmental impact and cost, an alternative approach based on variable rate fungicide application (VRFA) and selective harvest (SH) is needed. This study was undertaken to evaluate the economic viability of adopting VRSA and SH in winter wheat and the environmental benefit in terms of chemical reduction is also discussed. High resolution data of crop canopy properties, yellow rust, fusarium head blight (FHB), soil properties and yield were subjected to k-means cluster analysis to develop management zone (MZ) maps for one field in Bedfordshire, UK. Virtual cost-benefit analysis for VRFA was performed on three fungicide application timings, namely, T1 and T2 focused on yellow rust, and T3 focused on FHB. Cost-benefit analysis was also applied to SH, which assumed different selling prices between healthy and grain downgraded due to mycotoxin infection. Results showed that in this study VRFA allowed for fungicide reductions of 22.24% at T1 and T2 and 25.93% at T3 when compared to HRFA. SH reduced the risk of market rejection due to low quality and high mycotoxin content. Gross profit of combining SH and VRFA was £83.35 per hectare per year, divided into SH £48.04 ha−1, and VRFA £8.8 ha−1 for T1 and T2 and £17.7 ha−1 for T3. Total profit when considering soil and crop scanning costs would be £66.85 ha−1 per year, which is roughly equivalent to €80 or $90 ha−1 per year. This study was restricted to a single field but demonstrates the potential of fungicide reductions and economic viability of this MZ concept.Item Open Access Hyperspectral measurements of yellow rust and fasarium head blight in cereal crops: Part 2: On-line field measurement(Elsevier, 2018-02-08) Whetton, Rebecca L.; Waine, Toby W.; Mouazen, Abdul M.Yellow rust and fusarium head blight cause significant losses in wheat and barley yields. Mapping the spatial distribution of these two fungal diseases at high sampling resolution is essential for variable rate fungicide application (in case of yellow rust) and selective harvest (in case of fusarium head blight). This study implemented a hyperspectral line imager (spectrograph) for on-line measurement of these diseases in wheat and barley in four fields in Bedfordshire, the UK. The % coverage was assessed based on two methods, namely, infield visual assessment (IVA) and photo interpretation assessment (PIA) based on 100-point grid overlaid RGB images. The spectral data and disease assessments were subjected to partial least squares regression (PLSR) analyses with leave-one-out cross-validation. Results showed that both diseases can be measured with similar accuracy, and that the performance is better in wheat, as compared to barley. For fusarium, it was found that PIA analysis was more accurate than IVA. The prediction accuracy obtained with PIA was classified as good to moderately accurate, since residual prediction deviation (RPD) values were 2.27 for wheat and 1.56 for barley, and R2 values were 0.82 and 0.61, respectively. Similar results were obtained for yellow rust but with IVA, where model performance was classified as moderately accurate in barley (RPD = 1.67, R2 = 0.72) and good in wheat (RPD = 2.19, R2 = 0.78). It is recommended to adopt the proposed approach to map yellow rust and fusarium head blight in wheat and barley.Item Open Access Hyperspectral measurements of yellow rust and fusarium head blight in cereal crops: Part 1: Laboratory study(Elsevier, 2017-12-11) Whetton, Rebecca L.; Hassall, Kirsty L.; Waine, Toby W.; Mouazen, Abdul M.This paper assesses the potential use of a hyperspectral camera for measurement of yellow rust and fusarium head blight in wheat and barley canopy under laboratory conditions. Scanning of crop canopy in trays occurred between anthesis growth stage 60, and hard dough growth stage 87. Visual assessment was made at four levels, namely, at the head, at the flag leaves, at 2nd and 3rd leaves, and at the lower canopy. Partial least squares regression (PLSR) analyses were implemented separately on data captured at four growing stages to establish separate calibration models to predict the percentage coverage of yellow rust and fusarium head blight infection. Results showed that the standard deviation between 500 and 650 nm and the squared difference between 650 and 700 nm wavelengths were found to be significantly different between healthy and infected canopy particularly for yellow rust in both crops, whereas the effect of water-stress was generally found to be unimportant. The PLSR yellow rust models were of good prediction capability for 6 out of 8 growing stages, a very good prediction at early milk stage in wheat and a moderate prediction at the late milk development stage in barley. For fusarium, predictions were very good for seven growing stages and of good performance for anthesis growing stage in wheat, with best performing for the milk development stages. However, the root mean square error of predictions for yellow rust were almost half of those for fusarium, suggesting higher prediction accuracies for yellow rust measurement under laboratory conditions.Item Open Access Modelling the influence of soil properties on crop yields using a non-linear NFIR model and laboratory data(MDPI, 2021-02-16) Whetton, Rebecca L.; Zhao, Yifan; Nawar, Said; Mouazen, Abdul M.This paper introduces a new non-linear correlation analysis method based on a non-linear finite impulse response (NFIR) model to study and quantify the effects of ten soil properties on crop yield. Two versions of the NFIR model were implemented: NFIR-LN, accounting for both the linear and non-linear variability in the system, and NFIR-L, accounting for linear variability only. The performance of the NFIR models was compared with a non-linear random forest (RF) model, to predict oilseed rape (2013) and wheat (2014) yields in one field at Premslin, Germany. The ten soil properties were used as system inputs, whereas crop yield was the system output. Results demonstrated that the individual and total contribution of the soil properties on crop yield varied throughout the different cropping seasons, weather conditions, and crops. Both the NFIR-LN and RF models outperformed the NFIR-L model and explained up to 55.62% and 50.66% of the yield variation for years 2013 and 2014, respectively. The NFIR-LN and RF models performed equally during yield prediction, although the NFIR-LN model provided more consistent results through the two cropping seasons. Higher phosphorus and potassium contributions to the yield were calculated with the NFIR-LN model, suggesting this method outperforms the RF model.Item Open Access Multi-sensor and data fusion approach for determining yield limiting factors and for in-situ measurement of yellow rust and fusarium head blight in cereals(2016-12) Whetton, Rebecca L.; Mouazen, A. M.; Waine, Toby W.The world’s population is increasing and along with it, the demand for food. A novel parametric model (Volterra Non-linear Regressive with eXogenous inputs (VNRX)) is introduced for quantifying influences of individual and multiple soil properties on crop yield and normalised difference vegetation Index. The performance was compared to a random forest method over two consecutive years, with the best results of 55.6% and 52%, respectively. The VNRX was then implemented using high sampling resolution soil data collected with an on-line visible and near infrared (vis-NIR) spectroscopy sensor predicting yield variation of 23.21%. A hyperspectral imager coupled with partial least squares regression was successfully applied in the detection of fusarium head blight and yellow rust infection in winter wheat and barley canopies, under laboratory and on-line measurement conditions. Maps of the two diseases were developed for four fields. Spectral indices of the standard deviation between 500 to 650 nm, and the squared difference between 650 and 700 nm, were found to be useful in differentiating between the two diseases, in the two crops, under variable water stress. The optimisation of the hyperspectral imager for field measurement was based on signal-to-noise ratio, and considered; camera angle and distance, integration time, and light source angle and distance from the crop canopy. The study summarises in the proposal of a new method of disease management through suggested selective harvest and fungicide applications, for winter wheat and barley which theoretically reduced fungicide rate by an average of 24% and offers a combined saving of the two methods of £83 per hectare.